Thioalkalivibrio sp. K90mix

Gram-negativeRodMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Thioalkalivibrio

Description

Thioalkalivibrio sp. (strain K90mix) is an extremely salt tolerant (haloalkaliphilic), chemolithoautotrophic, sulfur-oxidizing Gram-negative bacterium isolated from a mixture of soda lake sediments. Thioalkalivibrio sp. uses CO2 as a carbon source and reduced sulfur compounds as an energy source. It has a pH optimum of 10 and can grow at salinities up to 4.3M of sodium and 3.6M of potassium. Thioalkalivibrio sp. can be used to remove noxious sulfur compounds from waste streams and energy carriers (bioremediation and carbon sequestration). (Adapted from: http://genome.jgi-psf.org/thi_k/thi_k.home.html). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusThioalkalivibrio
SpeciesThioalkalivibrio sp. K90mix
StrainK90mix

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Thioalkalivibrio sp. K90mix
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy source Chemolithoautotroph
PathogenicityNo

Genome Summary

Thioalkalivibrio sp. K90mix


Gene Summary

Adenine Count

48374 bp

Thymine Count

43540 bp

Guanine Count

76899 bp

Cytosine Count

71443 bp

Genome Length

240256 bp

Protein-coding Genes

276 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pilx n-terminal domain-containing pilus assembly proteinTK90_RS01040Not Available-225423 - 22662543062.9
prepilin-type n-terminal cleavage/methylation domain-containing proteinTK90_RS01045Not Available-226625 - 22749732019.4
gsph/fimt family pseudopilinTK90_RS01050Not Available-227491 - 22803919767.4
type iv pilin proteinTK90_RS01055Not Available+228243 - 22866515090.7
sumf1/egtb/pvdo family nonheme iron enzymeTK90_RS01060Q8R0F3+228850 - 22973134021.6
is110 family transposaseTK90_RS01065Not Available+229968 - 23096037806.6
type ii toxin-antitoxin system rele/pare family toxinTK90_RS01070Not Available+231150 - 2313447489.76
higa family addiction module antitoxinTK90_RS01075Q46560+231369 - 23166811321.7
protein disulfide oxidoreductaseTK90_RS01080Q46476-231766 - 23230520477.8
hypothetical proteinTK90_RS01085Not Available-232302 - 23273316702.1

Displaying genes 491 – 500 of 2925 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00100445'-pApG-3'C20H23N10O14P2Chemical structure of 5'-pApG-3'Not available
Average689.409Da
Monoisotopic689.088690196Da

Displaying 1–2 of 2 metabolites