Thioalkalivibrio sp. K90mix

Gram-negativeRodMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Thioalkalivibrio

Description

Thioalkalivibrio sp. (strain K90mix) is an extremely salt tolerant (haloalkaliphilic), chemolithoautotrophic, sulfur-oxidizing Gram-negative bacterium isolated from a mixture of soda lake sediments. Thioalkalivibrio sp. uses CO2 as a carbon source and reduced sulfur compounds as an energy source. It has a pH optimum of 10 and can grow at salinities up to 4.3M of sodium and 3.6M of potassium. Thioalkalivibrio sp. can be used to remove noxious sulfur compounds from waste streams and energy carriers (bioremediation and carbon sequestration). (Adapted from: http://genome.jgi-psf.org/thi_k/thi_k.home.html). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusThioalkalivibrio
SpeciesThioalkalivibrio sp. K90mix
StrainK90mix

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Thioalkalivibrio sp. K90mix
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy source Chemolithoautotroph
PathogenicityNo

Genome Summary

Thioalkalivibrio sp. K90mix


Gene Summary

Adenine Count

48374 bp

Thymine Count

43540 bp

Guanine Count

76899 bp

Cytosine Count

71443 bp

Genome Length

240256 bp

Protein-coding Genes

276 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cbb3-type cytochrome c oxidase subunit iTK90_RS00895Not Available+197279 - 19873051920.7
sco family proteinTK90_RS00900Not Available+198720 - 19933122599.8
hypothetical proteinTK90_RS00905Not Available+199331 - 19994822216.4
no-inducible flavohemoproteinTK90_RS00910Q9I0H4+200177 - 20135844207.6
gamma-glutamyl-gamma-aminobutyrate hydrolase family proteinTK90_RS00915Q9HDV0-201359 - 20218330159.4
amidoligase family proteinTK90_RS00920Not Available-202170 - 20316237760.8
dihydroneopterin aldolaseTK90_RS00925P0AC17+203274 - 20363913340.0
torf family putative porinTK90_RS00930Not Available+203894 - 20463126598.7
p-ii family nitrogen regulatorTK90_RS00935P21193+204697 - 20503512279.0
ammonium transporterTK90_RS00940P54147+205073 - 20632643737.6

Displaying genes 461 – 470 of 2925 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00100445'-pApG-3'C20H23N10O14P2Chemical structure of 5'-pApG-3'Not available
Average689.409Da
Monoisotopic689.088690196Da

Displaying 1–2 of 2 metabolites