Rhizobium leguminosarum bv. trifolii WSM2304

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium leguminosarum bv. trifolii WSM2304 is a gram-negative, rod-shaped bacterium that thrives in mesophilic temperature ranges, functioning as a chemotroph and displaying facultative anaerobic characteristics. This strain primarily colonizes the root nodules of legumes such as clover, contributing significantly to biological nitrogen fixation, a vital process that enriches soil quality and enhances plant growth. As a gram-negative organism, *R. leguminosarum* possesses a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, which plays a crucial role in its interactions with plant hosts and environmental adaptability. The rod shape of the bacterium allows for efficient motility and colonization of root surfaces, facilitating the establishment of symbiotic relationships with plant roots. Preferring mesophilic temperatures, this microbe optimally grows in temperate conditions, which are typically found in its natural habitats such as agricultural soils. As a chemotroph, *R. leguminosarum* derives its energy from chemical compounds rather than light, embodying the essence of nitrogen-fixing bacteria that convert atmospheric nitrogen into ammonia, thereby making nitrogen accessible to plants. Furthermore, its facultative anaerobic nature enables it to adapt to varying oxygen levels, thriving in both oxygen-rich environments and low-oxygen conditions within root nodules. This particular strain, WSM2304, is noteworthy for its unique ability to form effective symbiotic relationships with host plants, optimizing nitrogen fixation and supporting sustainable agricultural practices. Additionally, it is known to enhance the resistance of clover plants to various pathogens, underscoring its potential contributions to crop resilience and soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium leguminosarum
StrainWSM2304

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium leguminosarum bv. trifolii WSM2304
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Pisum sativum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Rhizobium leguminosarum bv. trifolii WSM2304

Accession NumberNC_011369.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
response regulatorRLEG2_RS22005Not Available+125 - 81124893.0
atp-binding proteinRLEG2_RS22010Not Available+814 - 210346760.4
efflux transporter outer membrane subunitRLEG2_RS22015Not Available+2219 - 367051224.4
hpch/hpai aldolase/citrate lyase family proteinRLEG2_RS22020Not Available-3681 - 451729643.6
maoc family dehydrataseRLEG2_RS22025Not Available-4514 - 496616729.1
acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alphaRLEG2_RS22030Not Available-4966 - 683166209.0
carboxyl transferase domain-containing proteinRLEG2_RS22035Not Available-6839 - 844957425.9
isovaleryl-coa dehydrogenaseRLEG2_RS22040Not Available-8446 - 959141155.6
type ii toxin-antitoxin system phd/yefm family antitoxinRLEG2_RS22045Not Available+9747 - 100079968.65
hypothetical proteinRLEG2_RS22050Not Available+9997 - 1041615935.1

Displaying genes 1 – 10 of 6661 in total

Pathways

4 pathways

Metabolites

120 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000645L-arabinonateC5H9O6Chemical structure of L-arabinonateNot available
Average165.122Da
Monoisotopic165.0404616Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm0001327L-fuconateC6H11O6Chemical structure of L-fuconateNot available
Average179.149Da
Monoisotopic179.0561117Da

Displaying 1–10 of 120 metabolites