Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga thiooxydans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemolithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga thiooxydans
Accession NumberJRQD00000000.1
Gene Summary
Adenine Count
703267 bp
Thymine Count
702872 bp
Guanine Count
589325 bp
Cytosine Count
594189 bp
Genome Length
2589653 bp
Protein-coding Genes
2521 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type antimicrobial peptide transport system, permease component | LP43_1954 | Not Available | + | 1972638 - 1973852 | 44112.9 |
| pqq-dependent oxidoreductase, gdhb family | LP43_1955 | Not Available | - | 1973849 - 1974964 | 41159.8 |
| selenoprotein o and cysteine-containing-like | LP43_1956 | Not Available | - | 1974990 - 1976612 | 61193.2 |
| alanine dehydrogenase | LP43_1957 | Not Available | + | 1976646 - 1977764 | 39422.1 |
| membrane-bound metal-dependent hydrolase | LP43_1958 | Not Available | - | 1977734 - 1978753 | 38614.5 |
| tpr repeat | LP43_1959 | Not Available | + | 1978905 - 1980503 | 59791.0 |
| lipid a core-o-antigen ligase | LP43_1960 | Not Available | + | 1980604 - 1982319 | 64190.9 |
| type iv pilin pila | LP43_1961 | Not Available | + | 1982478 - 1982921 | 15379.2 |
| methionyl-trna synthetase | LP43_1962 | Not Available | - | 1983042 - 1985078 | 76585.0 |
| hypothetical protein | LP43_1963 | Not Available | + | 1985258 - 1985761 | 19630.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.