Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga thiooxydans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemolithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga thiooxydans
Accession NumberJRQD00000000.1
Gene Summary
Adenine Count
703267 bp
Thymine Count
702872 bp
Guanine Count
589325 bp
Cytosine Count
594189 bp
Genome Length
2589653 bp
Protein-coding Genes
2521 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding protein | LP43_0533 | Not Available | - | 548408 - 548593 | 7077.23 |
| hypothetical protein | LP43_0534 | Not Available | - | 548596 - 549306 | 27315.5 |
| dephospho-coa kinase | LP43_0535 | Not Available | - | 549424 - 550038 | 23181.1 |
| leader peptidase (prepilin peptidase)/n-methyltransferase | LP43_0536 | Not Available | - | 550038 - 550907 | 32092.9 |
| type iv fimbrial assembly protein pilc | LP43_0537 | Not Available | - | 550910 - 552157 | 45430.6 |
| type iv fimbrial assembly, atpase pilb | LP43_0538 | Not Available | - | 552161 - 553876 | 62260.1 |
| hypothetical protein | LP43_0539 | Not Available | + | 554022 - 554150 | 4675.84 |
| diaminopimelate decarboxylase | LP43_0540 | Not Available | + | 554160 - 555410 | 45520.0 |
| diaminopimelate epimerase | LP43_0541 | Not Available | + | 555413 - 556258 | 30351.3 |
| hypothetical protein | LP43_0542 | Not Available | + | 556234 - 556944 | 26673.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.