Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga thiooxydans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemolithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga thiooxydans
Accession NumberJRQD00000000.1
Gene Summary
Adenine Count
703267 bp
Thymine Count
702872 bp
Guanine Count
589325 bp
Cytosine Count
594189 bp
Genome Length
2589653 bp
Protein-coding Genes
2521 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phytoene desaturase, pro-zeta-carotene producing | LP43_0473 | Not Available | - | 488222 - 489511 | 47531.4 |
| phytoene synthase | LP43_0474 | Not Available | - | 489508 - 490356 | 32787.2 |
| ferredoxin, 2fe-2s | LP43_0475 | Not Available | - | 490353 - 490565 | 8376.32 |
| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferase (farnesyldiphosphate synthase)/geranylgeranyl pyrophosphate synthetase | LP43_0476 | Not Available | - | 490703 - 491671 | 35557.2 |
| lsu ribosomal protein l21p | LP43_0477 | Not Available | + | 491887 - 492198 | 11299.8 |
| lsu ribosomal protein l27p | LP43_0478 | Not Available | + | 492221 - 492478 | 9127.85 |
| gtp-binding protein obg | LP43_0479 | Not Available | + | 492589 - 493647 | 38356.3 |
| glutamate 5-kinase | LP43_0480 | Not Available | + | 493654 - 494784 | 40772.9 |
| ssu ribosomal protein s20p | LP43_0481 | Not Available | - | 494854 - 495114 | 9391.48 |
| exodeoxyribonuclease iii | LP43_0482 | Not Available | + | 495226 - 496005 | 30284.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.