Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga thiooxydans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemolithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga thiooxydans
Accession NumberJRQD00000000.1
Gene Summary
Adenine Count
703267 bp
Thymine Count
702872 bp
Guanine Count
589325 bp
Cytosine Count
594189 bp
Genome Length
2589653 bp
Protein-coding Genes
2521 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | LP43_0241 | Not Available | - | 254599 - 259083 | 163061.0 |
| phosphoribosylaminoimidazole carboxylase catalytic subunit | LP43_0242 | Not Available | + | 259314 - 259805 | 17176.0 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | LP43_0243 | Not Available | + | 259904 - 261043 | 40890.8 |
| hypothetical protein | LP43_0244 | Not Available | + | 261072 - 261353 | 10716.9 |
| dna topoisomerase i | LP43_0245 | Not Available | - | 261358 - 263643 | 85577.1 |
| protein of unknown function smg | LP43_0246 | Not Available | - | 263730 - 264197 | 18260.8 |
| rossmann fold nucleotide-binding protein smf possibly involved in dna uptake | LP43_0247 | Not Available | - | 264231 - 265337 | 39309.9 |
| hypothetical protein | LP43_0248 | Not Available | - | 265354 - 266385 | 38452.9 |
| cytochrome c553 | LP43_0249 | Not Available | + | 266578 - 266895 | 10742.8 |
| peptide deformylase | LP43_0250 | Not Available | + | 267042 - 267545 | 18990.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.