Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga thiooxydans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemolithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga thiooxydans
Accession NumberJRQD00000000.1
Gene Summary
Adenine Count
703267 bp
Thymine Count
702872 bp
Guanine Count
589325 bp
Cytosine Count
594189 bp
Genome Length
2589653 bp
Protein-coding Genes
2521 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | LP43_2264 | Not Available | - | 2285802 - 2287439 | 61343.3 |
| histidyl-trna synthetase | LP43_2265 | Not Available | - | 2287470 - 2288726 | 46771.8 |
| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase | LP43_2266 | Not Available | - | 2288729 - 2289853 | 40526.0 |
| hypothetical protein | LP43_2267 | Not Available | - | 2289853 - 2290782 | 34257.9 |
| type iv pilus biogenesis protein pilf | LP43_2268 | Not Available | - | 2290779 - 2291549 | 28825.3 |
| ribosomal rna large subunit methyltransferase n | LP43_2269 | Not Available | - | 2291546 - 2292649 | 41304.1 |
| nucleoside diphosphate kinase | LP43_2270 | Not Available | - | 2292659 - 2293090 | 15609.5 |
| nad kinase | LP43_2271 | Not Available | + | 2293323 - 2294138 | 29225.2 |
| dna repair protein recn | LP43_2272 | Not Available | + | 2294132 - 2295805 | 62384.0 |
| ferric uptake regulation protein fur | LP43_2273 | Not Available | - | 2295810 - 2296226 | 15856.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.