Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga thiooxydans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemolithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga thiooxydans
Accession NumberJRQD00000000.1
Gene Summary
Adenine Count
703267 bp
Thymine Count
702872 bp
Guanine Count
589325 bp
Cytosine Count
594189 bp
Genome Length
2589653 bp
Protein-coding Genes
2521 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | LP43_2014 | Not Available | + | 2043198 - 2044154 | 34956.7 |
| oligopeptide transport system permease protein | LP43_2015 | Not Available | + | 2044174 - 2045586 | 52423.1 |
| dipeptide transport atp-binding protein dppf | LP43_2016 | Not Available | + | 2045583 - 2047616 | 75591.2 |
| hypothetical protein | LP43_2017 | Not Available | + | 2047594 - 2047839 | 9560.26 |
| hypothetical protein | LP43_2018 | Not Available | - | 2047855 - 2048094 | 8914.81 |
| rna polymerase sigma factor rpoe | LP43_2019 | Not Available | - | 2048099 - 2048710 | 22999.2 |
| hypothetical protein | LP43_2020 | Not Available | + | 2048811 - 2049155 | 11372.4 |
| hypothetical protein | LP43_2021 | Not Available | + | 2049225 - 2049845 | 22976.8 |
| putative sulfite oxidase subunit yedy | LP43_2022 | Not Available | + | 2049855 - 2050814 | 37032.1 |
| membrane protein yedz | LP43_2023 | Not Available | + | 2050768 - 2051424 | 25434.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.