Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga thiooxydans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemolithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylophaga thiooxydans
Accession NumberJRQD00000000.1
Gene Summary
Adenine Count
703267 bp
Thymine Count
702872 bp
Guanine Count
589325 bp
Cytosine Count
594189 bp
Genome Length
2589653 bp
Protein-coding Genes
2521 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper-sensing two-component system response regulator cpxr | LP43_1833 | Not Available | + | 1858584 - 1859270 | 25812.1 |
| copper sensory histidine kinase cpxa | LP43_1834 | Not Available | + | 1859273 - 1860625 | 50362.6 |
| hypothetical protein | LP43_1835 | Not Available | + | 1860795 - 1860926 | 4785.79 |
| peptide methionine sulfoxide reductase msrb | LP43_1836 | Not Available | + | 1860933 - 1861331 | 14824.0 |
| endonuclease | LP43_1837 | Not Available | + | 1861318 - 1861575 | 9870.72 |
| abc transporter atp-binding protein uup | LP43_1838 | Not Available | + | 1861642 - 1863237 | 60304.9 |
| putative lipoprotein | LP43_1839 | Not Available | + | 1863310 - 1863879 | 20319.4 |
| hypothetical protein | LP43_1840 | Not Available | + | 1863881 - 1864222 | 13100.4 |
| dihydrolipoamide dehydrogenase | LP43_1841 | Not Available | - | 1864224 - 1865645 | 51246.9 |
| dodecin | LP43_1842 | Not Available | - | 1865669 - 1865878 | 7828.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.