Methylophaga thiooxydans

Gram-negativeNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Methylophaga

Description

Methylophaga thiooxydans is a gram-negative, rod-shaped microbe that thrives in mesophilic temperatures, categorized as a chemoautotroph, and can be found in various body sites, including soil, sediment, and aquatic environments, across all possible species. As a chemoautotroph, Methylophaga thiooxydans derives its energy from chemical reactions, specifically the oxidation of sulfur compounds, and can synthesize its own organic compounds from carbon dioxide. This microbe is an obligate aerobe, requiring oxygen to survive and grow, which is evident in its ability to thrive in environments with high oxygen levels. The gram-negative cell wall of Methylophaga thiooxydans provides it with a degree of resistance to environmental stresses, while its rod-shaped morphology allows for efficient movement and colonization of new environments. The mesophilic temperature preference of this microbe enables it to thrive in a wide range of environments, from aquatic ecosystems to soil and sediment. As a chemoautotroph, Methylophaga thiooxydans plays a crucial role in the sulfur cycle, contributing to the oxidation of sulfur compounds and the formation of sulfate. Methylophaga thiooxydans has been found to have a unique ability to oxidize dimethyl sulfide, a volatile organic compound, which contributes to the formation of acidic rain and has implications for climate regulation. This microbe's ability to thrive in diverse environments and its role in the sulfur cycle make it a significant component of many ecosystems, and its study has led to a greater understanding of the complex interactions between microorganisms and their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusMethylophaga
SpeciesMethylophaga thiooxydans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemolithotroph
PathogenicityNot Available

Genome Summary

Methylophaga thiooxydans

Accession NumberJRQD00000000.1

Gene Summary

Adenine Count

703267 bp

Thymine Count

702872 bp

Guanine Count

589325 bp

Cytosine Count

594189 bp

Genome Length

2589653 bp

Protein-coding Genes

2521 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sensor histidine kinaseLP43_1194Not Available+1219595 - 122025124996.2
bara-associated response regulator uvryLP43_1195Not Available+1220248 - 122090123959.6
hypothetical proteinLP43_1196Not Available+1221828 - 122213611356.0
nnrs protein involved in response to noLP43_1197Not Available+1222222 - 122300429656.3
Trna-proNot AvailableNot Available+1223815 - 1223891Not Available
hypothetical proteinLP43_1199Not Available+1224630 - 122522921959.6
hypothetical proteinLP43_1200Not Available+1225293 - 122583220560.0
transcriptional regulator, gntr family domain/aspartate aminotransferaseLP43_1201Not Available+1226563 - 122794550540.9
6-phosphogluconate dehydrogenase, decarboxylatingLP43_1202Not Available+1228355 - 12285426978.88
cys regulon transcriptional activator cysbLP43_1203Not Available-1228745 - 122966834170.3

Displaying genes 1191 – 1200 of 2559 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–1 of 1 metabolites