Rickettsia rickettsii str. Sheila Smith

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia rickettsii str. Sheila Smith is a Gram-negative, rod-shaped bacterium that is nonsporulating and exhibits aerobic metabolism. This strain thrives optimally at 37.0°C, a temperature that aligns with the typical physiological conditions of its host-associated habitat. As a member of the Rickettsiaceae family, R. rickettsii is part of a group of obligate intracellular pathogens that require living hosts for growth and reproduction. The nonsporulating nature of this strain indicates a reliance on host environments for survival, which is characteristic of many rickettsial species. The aerobic requirement suggests that R. rickettsii str. Sheila Smith utilizes molecular oxygen for its metabolic processes, potentially influencing its interactions with host cells and the surrounding microbiome. The specific ecological niche of this strain underscores its adaptation to living within eukaryotic cells, where it may exploit host cellular machinery for its replication and survival. Understanding these traits provides insights into the physiological adaptations that enable Rickettsia rickettsii str. Sheila Smith to persist in host-associated environments, highlighting the intricate relationship between this bacterium and its hosts in the broader context of microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia rickettsii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Rickettsia rickettsii str. Sheila Smith
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia rickettsii str. Sheila Smith

Accession NumberNC_009882.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1401 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyruvate, water dikinase regulatory proteinA1G_RS00005Not Available+1 - 82231651.4
thioredoxinA1G_RS00010Not Available+1082 - 139911995.6
abc transporter atp-binding proteinA1G_RS00015Not Available+1409 - 215827716.7
abc transporter permeaseA1G_RS00020Not Available+2159 - 293529910.0
fad-dependent oxidoreductaseA1G_RS00025Not Available+2932 - 6033118220.0
type ii toxin-antitoxin system pemk/mazf family toxinA1G_RS00030Not Available-6077 - 63168958.82
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseA1G_RS00035Not Available-6443 - 723728335.2
3-hydroxyacyl-acp dehydratase fabzA1G_RS00040Not Available-7244 - 768116291.1
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseA1G_RS00045Not Available-7877 - 891436796.7
patatin-like phospholipase family proteinA1G_RS08855Not Available+9612 - 998614288.1

Displaying genes 1 – 10 of 1442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

24 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003971heme bC34H30FeN4O4Not available14875-96-8
Average614.484Da
Monoisotopic614.162739Da
BASm0003997Fe(II)-heme oC49H56FeN4O5Chemical structure of Fe(II)-heme oNot available
Average836.856Da
Monoisotopic836.361104Da
BASm0004092UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC41H61N9O28P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1189.924Da
Monoisotopic1189.312320676Da
BASm0004093di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC87H139N7O23P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1713.045Da
Monoisotopic1711.941952079Da
BASm0004094di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC95H152N8O28P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1916.239Da
Monoisotopic1915.021324602Da
BASm0004925UDP-N-acetyl-alpha-D-muramateC20H28N3O19P2Chemical structure of UDP-N-acetyl-alpha-D-muramateNot available
Average676.395Da
Monoisotopic676.080870429Da
BASm0007001UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateC28H39N5O23P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateNot available
Average875.582Da
Monoisotopic875.1533009Da
BASm0007003UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioateC35H51N7O26P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioateNot available
Average1047.7583Da
Monoisotopic1047.235898Da
BASm00074603-deoxy-alpha-D-manno-2-octulosonate-8-phosphateC8H12O11PChemical structure of 3-deoxy-alpha-D-manno-2-octulosonate-8-phosphateNot available
Average315.148Da
Monoisotopic315.0133689Da
BASm00074613-deoxy-alpha-D-manno-oct-2-ulosonateC8H13O8Chemical structure of 3-deoxy-alpha-D-manno-oct-2-ulosonateNot available
Average237.185Da
Monoisotopic237.061591Da

Displaying 11–20 of 24 metabolites