Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 is a mesophilic, heterotrophic microbe that thrives in a wide range of temperatures, typically between 10°C and 45°C, making it a opportunistic inhabitant of various environments. As a heterotroph, it relies on organic compounds as its primary energy source, utilizing a variety of metabolic pathways to generate energy. This microbe is a Gram-positive, non-motile rod-shaped bacterium, typically measuring between 0.5-1.5 μm in width and 1-5 μm in length. Its cells typically inhabit the gastrointestinal tract of infants, where they play a crucial role in the development of the infant's gut microbiome. Bifidobacterium longum subsp. infantis ATCC 15697 is an obligate anaerobe, meaning it requires a low-oxygen environment to survive and thrive. In fact, it is unable to grow in the presence of oxygen and is extremely sensitive to even small amounts of oxygen. This adaptability to low-oxygen environments is thought to be an important factor in its ability to colonize the infant gut, where oxygen levels are typically low. This microbe has also been shown to play a vital role in the human gut microbiome, particularly during the early stages of life. Research has highlighted its importance in the digestion of complex carbohydrates, production of short-chain fatty acids, and regulation of the immune system. In addition, studies have demonstrated its ability to produce antimicrobial peptides and other compounds that promote the growth of beneficial gut bacteria. Furthermore, Bifidobacterium longum subsp. infantis ATCC 15697 has been implicated in various diseases, including necrotizing enterocolitis, a life-threatening condition that affects premature infants. The development of probiotic therapies targeting this microbe has shown promise in mitigating the severity of this condition. Overall, the unique characteristics and functional adaptations of Bifidobacterium longum subsp. infantis ATCC 15697 make it an important component of the human gut microbiome, with significant implications for human health and disease.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium longum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementClusters-Pairs-Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088

Accession NumberNC_011593.1

Gene Summary

Adenine Count

569550 bp

Thymine Count

567426 bp

Guanine Count

851277 bp

Cytosine Count

844495 bp

Genome Length

2832748 bp

Protein-coding Genes

2552 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Head-to-tail-connectorBLON_RS05635Not Available-1304837 - 130525615094.6
Major capsid proteinBLON_RS05640O64210-1305402 - 130628931018.2
hypothetical proteinBLON_RS05645Not Available-1306318 - 130698623313.7
Capsid maturation proteaseBLON_RS05650Not Available-1307059 - 130807838058.4
PortalBLON_RS05655Q05220-1307999 - 130943253201.8
Gp22BLON_RS05660Not Available-1309450 - 131106960554.4
Terminase small subunitBLON_RS05665Not Available-1311082 - 131161820706.2
AttlNot AvailableNot Available+1674170 - 1674183Not Available
tyrosine-type recombinase/integraseBLON_RS07930Not Available-1683887 - 168429115430.9
hypothetical proteinBLON_RS07935Not Available-1684288 - 16845489842.01

Displaying genes 1 – 10 of 2670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

120 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm0000738D-lyxoseC5H10O5Chemical structure of D-lyxose1114-34-7
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 120 metabolites