Paraburkholderia phymatum STM815

Gram-negativeRodNon-motileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia phymatum STM815 is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobic respiration and is nonsporulating. This microbe is primarily host-associated, indicating a close relationship with its host organism, which may influence its physiological characteristics and ecological roles. As a member of the Burkholderia genus, P. phymatum STM815 is likely to engage in complex interactions with its host, potentially contributing to nutrient cycling or plant health in symbiotic relationships. The facultative aerobic nature of this bacterium suggests it can adapt to varying oxygen levels, which may enhance its survival in diverse environments associated with its host. This adaptability to both aerobic and anaerobic conditions, combined with its nonsporulating trait, positions P. phymatum STM815 as a potentially significant player in the microbiome of its host, capable of thriving in fluctuating conditions without the need for sporulation as a survival strategy. Further research into its specific interactions and functions within its ecological niche could provide valuable insights into its role in host health and microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia phymatum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Paraburkholderia phymatum STM815
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia phymatum STM815

Accession NumberNC_010625.1

Gene Summary

Adenine Count

364848 bp

Thymine Count

361432 bp

Guanine Count

587180 bp

Cytosine Count

591433 bp

Genome Length

1904893 bp

Protein-coding Genes

1675 genes

Non-Coding Genes

34 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Issod7, transposaseBPHY_RS28695Not Available-238013 - 23934149889.2
AttlNot AvailableNot Available+239614 - 239631Not Available
hypothetical proteinBPHY_RS42010Not Available-239913 - 24020910458.5
hypothetical proteinBPHY_RS28705Not Available-240471 - 24102519924.9
duf3892 domain-containing proteinBPHY_RS43385Not Available-241348 - 2416029679.5
peptide transporterBPHY_RS28715Not Available-241731 - 2418594268.98
duf3761 domain-containing proteinBPHY_RS39945Not Available-241894 - 24221111115.7
Hypothetical proteinBPHY_RS39950Not Available-242248 - 24308131562.9
Transposase, putativeBPHY_RS28725Not Available-243406 - 24447640338.5
Paar repeat-containing proteinBPHY_RS39960Not Available-244652 - 2449369948.82

Displaying genes 1 – 10 of 1709 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm00073665-hydroxyectoineC6H10N2O3Chemical structure of 5-hydroxyectoineNot available
Average158.1552Da
Monoisotopic158.0691422Da
BASm0034629Cinnamic acidC9H8O2Chemical structure of Cinnamic acidNULL
Average148.1586Da
Monoisotopic148.0524295Da

Displaying 1–3 of 3 metabolites