Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Aliivibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Aliivibrio |
| Species | Aliivibrio fischeri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Aliivibrio fischeri MJ11
Accession NumberNC_011184.1
Gene Summary
Adenine Count
886021 bp
Thymine Count
889424 bp
Guanine Count
564434 bp
Cytosine Count
564850 bp
Genome Length
2905029 bp
Protein-coding Genes
2556426 genes
Non-Coding Genes
348603 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-glutamate ligase-like protein | VFMJ11_RS12015 | Not Available | - | 1030771 - 1031736 | 34883.2 |
| inactive transglutaminase family protein | VFMJ11_RS12020 | Not Available | - | 1031740 - 1033248 | 55894.3 |
| atp-dependent zinc protease | VFMJ11_RS12025 | Not Available | - | 1033357 - 1034127 | 28536.2 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | VFMJ11_RS12030 | B5FCP7 | - | 1034207 - 1035181 | 37250.8 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | VFMJ11_RS12035 | B5FCP8 | - | 1035218 - 1035946 | 27193.5 |
| aspartate--trna ligase | VFMJ11_RS12040 | B5FCP9 | + | 1036333 - 1038108 | 65807.7 |
| crossover junction endodeoxyribonuclease ruvc | VFMJ11_RS12045 | Q5E6A1 | + | 1038261 - 1038782 | 18400.5 |
| holliday junction branch migration protein ruva | VFMJ11_RS12050 | B5FCQ1 | + | 1038888 - 1039511 | 22552.4 |
| holliday junction branch migration dna helicase ruvb | VFMJ11_RS12055 | B5FCQ2 | + | 1039540 - 1040553 | 37779.4 |
| cytochrome ubiquinol oxidase subunit i | VFMJ11_RS12060 | P0ABK0 | + | 1040935 - 1042521 | 58918.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.