Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Aliivibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Aliivibrio |
| Species | Aliivibrio fischeri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Aliivibrio fischeri MJ11
Accession NumberNC_011184.1
Gene Summary
Adenine Count
886021 bp
Thymine Count
889424 bp
Guanine Count
564434 bp
Cytosine Count
564850 bp
Genome Length
2905029 bp
Protein-coding Genes
2556426 genes
Non-Coding Genes
348603 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome hibernation-promoting factor, hpf/yfia family | VFMJ11_RS09965 | P71346 | - | 598790 - 599143 | 13116.7 |
| outer membrane protein assembly factor bamd | VFMJ11_RS09970 | Q9KU21 | - | 599583 - 600308 | 27833.1 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | VFMJ11_RS09975 | Q87S65 | + | 600470 - 601444 | 36672.4 |
| peptidoglycan editing factor pgef | VFMJ11_RS09980 | P44552 | + | 601447 - 602181 | 26900.8 |
| atp-dependent chaperone clpb | VFMJ11_RS09985 | Q9KU18 | + | 602287 - 604872 | 96331.0 |
| 16s ribosomal rna | Not Available | Not Available | + | 605311 - 606863 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 607266 - 610156 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 610252 - 610367 | Not Available |
| Trna-asp | Not Available | Not Available | + | 610436 - 610512 | Not Available |
| Trna-trp | Not Available | Not Available | + | 610549 - 610625 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.