Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Aliivibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Aliivibrio |
| Species | Aliivibrio fischeri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Aliivibrio fischeri MJ11
Accession NumberNC_011184.1
Gene Summary
Adenine Count
886021 bp
Thymine Count
889424 bp
Guanine Count
564434 bp
Cytosine Count
564850 bp
Genome Length
2905029 bp
Protein-coding Genes
2556426 genes
Non-Coding Genes
348603 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pitrilysin family protein | VFMJ11_RS09865 | P55679 | + | 576947 - 579799 | 105837.0 |
| glutamate--cysteine ligase | VFMJ11_RS09870 | B5FAD9 | + | 579931 - 581496 | 59406.0 |
| hypothetical protein | VFMJ11_RS09875 | Not Available | + | 581563 - 582162 | 22766.9 |
| s-ribosylhomocysteine lyase | VFMJ11_RS09880 | B5FAE1 | + | 582194 - 582712 | 18903.6 |
| hlyc/corc family transporter | VFMJ11_RS09885 | P37908 | - | 582806 - 584080 | 47269.7 |
| inner membrane protein ypjd | VFMJ11_RS09890 | P64434 | - | 584214 - 585008 | 29511.3 |
| signal recognition particle protein | VFMJ11_RS09895 | P0AGD9 | + | 585160 - 586533 | 50049.7 |
| 30s ribosomal protein s16 | VFMJ11_RS09900 | Q5E7F2 | + | 586791 - 587039 | 9169.11 |
| ribosome maturation factor rimm | VFMJ11_RS09905 | B5FAE6 | + | 587067 - 587594 | 20127.1 |
| trna (guanosine(37)-n1)-methyltransferase trmd | VFMJ11_RS09910 | Q5E7F0 | + | 587617 - 588366 | 27834.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.