Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Aliivibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Aliivibrio |
| Species | Aliivibrio fischeri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Aliivibrio fischeri MJ11
Accession NumberNC_011184.1
Gene Summary
Adenine Count
886021 bp
Thymine Count
889424 bp
Guanine Count
564434 bp
Cytosine Count
564850 bp
Genome Length
2905029 bp
Protein-coding Genes
2556426 genes
Non-Coding Genes
348603 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | + | 508245 - 508329 | Not Available |
| Trna-met | Not Available | Not Available | + | 508399 - 508472 | Not Available |
| ribosome maturation factor rimp | VFMJ11_RS09520 | B5FA77 | + | 508637 - 509092 | 16790.1 |
| transcription termination factor nusa | VFMJ11_RS09525 | P0AFF8 | + | 509110 - 510597 | 54833.0 |
| translation initiation factor if-2 | VFMJ11_RS09530 | B5FA79 | + | 510622 - 513303 | 97341.5 |
| 30s ribosome-binding factor rbfa | VFMJ11_RS09535 | B5FA80 | + | 513416 - 513823 | 15509.7 |
| trna pseudouridine(55) synthase trub | VFMJ11_RS09540 | B5FA81 | + | 513823 - 514773 | 35616.8 |
| 30s ribosomal protein s15 | VFMJ11_RS09545 | Q5E7L2 | + | 514936 - 515205 | 10060.1 |
| polyribonucleotide nucleotidyltransferase | VFMJ11_RS09550 | B5FA83 | + | 515544 - 517673 | 76841.1 |
| lipoprotein nlpi | VFMJ11_RS09555 | Q1C3L9 | + | 517794 - 518777 | 37672.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.