Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Aliivibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Aliivibrio |
| Species | Aliivibrio fischeri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Aliivibrio fischeri MJ11
Accession NumberNC_011184.1
Gene Summary
Adenine Count
886021 bp
Thymine Count
889424 bp
Guanine Count
564434 bp
Cytosine Count
564850 bp
Genome Length
2905029 bp
Protein-coding Genes
2556426 genes
Non-Coding Genes
348603 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase dbpa | VFMJ11_RS00920 | P21693 | - | 215840 - 217228 | 51324.0 |
| diguanylate cyclase | VFMJ11_RS00925 | P54595 | + | 217531 - 218979 | 54346.3 |
| siderophore ferric iron reductase | VFMJ11_RS00930 | Not Available | + | 219058 - 219789 | 28151.4 |
| mfs transporter | VFMJ11_RS00935 | Not Available | - | 219805 - 221010 | 43540.8 |
| abc transporter atp-binding protein | VFMJ11_RS00940 | P07821 | + | 221145 - 221912 | 28365.4 |
| abc transporter substrate-binding protein | VFMJ11_RS00945 | Q81L65 | + | 221951 - 222844 | 33177.4 |
| fe(3+)-hydroxamate abc transporter permease fhub | VFMJ11_RS00950 | P06972 | + | 222857 - 224860 | 71463.6 |
| iuca/iucc family siderophore biosynthesis protein | VFMJ11_RS00955 | Q76BS7 | + | 225009 - 226784 | 67181.6 |
| gnat family n-acetyltransferase | VFMJ11_RS00960 | Q47317 | + | 226777 - 227688 | 36418.2 |
| iuca/iucc family siderophore biosynthesis protein | VFMJ11_RS00965 | Q76BS5 | + | 227688 - 229448 | 66620.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.