Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Aliivibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Aliivibrio |
| Species | Aliivibrio fischeri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Aliivibrio fischeri MJ11
Accession NumberNC_011184.1
Gene Summary
Adenine Count
886021 bp
Thymine Count
889424 bp
Guanine Count
564434 bp
Cytosine Count
564850 bp
Genome Length
2905029 bp
Protein-coding Genes
2556426 genes
Non-Coding Genes
348603 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygalactonokinase | VFMJ11_RS00170 | P31459 | + | 42270 - 43175 | 33379.1 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | VFMJ11_RS00175 | Not Available | + | 43168 - 43809 | 22572.7 |
| trap transporter substrate-binding protein | VFMJ11_RS00180 | P37735 | + | 43842 - 44834 | 36833.8 |
| trap transporter small permease | VFMJ11_RS00185 | Not Available | + | 44892 - 45398 | 19431.8 |
| trap transporter large permease | VFMJ11_RS00190 | Q312S1 | + | 45398 - 46678 | 45470.8 |
| galactonate dehydratase | VFMJ11_RS00195 | Q6CYT9 | + | 46690 - 47838 | 43053.5 |
| dihydroxy-acid dehydratase | VFMJ11_RS00200 | Q8RDJ9 | + | 47841 - 49532 | 60529.2 |
| dihydrodipicolinate synthase family protein | VFMJ11_RS00205 | Q04796 | + | 49529 - 50434 | 34267.5 |
| hypothetical protein | VFMJ11_RS00210 | Not Available | + | 50613 - 50864 | 9171.76 |
| hypothetical protein | VFMJ11_RS21130 | Not Available | - | 50921 - 51073 | 5967.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.