Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Aliivibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Aliivibrio |
| Species | Aliivibrio fischeri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Aliivibrio fischeri MJ11
Accession NumberNC_011184.1
Gene Summary
Adenine Count
886021 bp
Thymine Count
889424 bp
Guanine Count
564434 bp
Cytosine Count
564850 bp
Genome Length
2905029 bp
Protein-coding Genes
2556426 genes
Non-Coding Genes
348603 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | VFMJ11_RS20420 | P0A9W9 | + | 2859310 - 2859852 | 19608.6 |
| duf1488 domain-containing protein | VFMJ11_RS20425 | Not Available | - | 2859845 - 2860108 | 9986.45 |
| shikimate dehydrogenase | VFMJ11_RS20430 | B5FCV8 | - | 2860108 - 2860929 | 29936.9 |
| sua5/ycio/yrdc/ywlc family protein | VFMJ11_RS20435 | Q5E1R5 | - | 2861002 - 2861559 | 19887.9 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | VFMJ11_RS20440 | Q5E1R4 | + | 2861759 - 2862244 | 16804.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | VFMJ11_RS20445 | Q5E1R3 | + | 2862247 - 2863359 | 40877.2 |
| type i dna topoisomerase | VFMJ11_RS20450 | P45771 | - | 2863397 - 2863966 | 21217.3 |
| duf494 family protein | VFMJ11_RS20455 | B5FCW3 | - | 2863977 - 2864450 | 18132.6 |
| dna-processing protein dpra | VFMJ11_RS20460 | P30852 | - | 2864453 - 2865556 | 39647.5 |
| lysm peptidoglycan-binding domain-containing protein | VFMJ11_RS20465 | Not Available | - | 2865571 - 2866641 | 39944.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.