Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Aliivibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Aliivibrio |
| Species | Aliivibrio fischeri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Aliivibrio fischeri MJ11
Accession NumberNC_011184.1
Gene Summary
Adenine Count
886021 bp
Thymine Count
889424 bp
Guanine Count
564434 bp
Cytosine Count
564850 bp
Genome Length
2905029 bp
Protein-coding Genes
2556426 genes
Non-Coding Genes
348603 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | VFMJ11_RS08350 | P37773 | + | 257747 - 259126 | 50605.3 |
| flavin prenyltransferase ubix | VFMJ11_RS08355 | Q9KP38 | + | 259128 - 259745 | 22050.0 |
| thiamine abc transporter substrate binding subunit | VFMJ11_RS08360 | P31550 | + | 259960 - 260976 | 37570.5 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | VFMJ11_RS08365 | P31549 | + | 261019 - 262623 | 59074.1 |
| thiamine abc transporter atp-binding protein | VFMJ11_RS08370 | Q5E882 | + | 262623 - 263327 | 26088.8 |
| rna polymerase-associated protein rapa | VFMJ11_RS08375 | B5FGE9 | + | 263521 - 266430 | 109213.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | VFMJ11_RS08380 | Q87LD3 | + | 266493 - 267230 | 28912.7 |
| universal stress protein | VFMJ11_RS08385 | Not Available | - | 267281 - 267718 | 16108.7 |
| trap transporter permease | VFMJ11_RS08390 | Not Available | - | 267770 - 270346 | 92562.2 |
| taxi family trap transporter solute-binding subunit | VFMJ11_RS08395 | Not Available | - | 270643 - 271617 | 34689.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.