Aeromonas salmonicida subsp. salmonicida A449

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas salmonicida has been recognized as a pathogen of fish for over 100 years. In 1894 Emmerich and Weibel made the first report of its isolation during a disease outbreak at a Bavarian brown trout hatchery. The manifestations of the disease include furuncle-like swelling and, at a later stage, ulcerative lesions on infected trout. Since that time a number of subspecies of Aeromonas salmonicida have been recognized, although the taxonomy of the species is far from settled. While Aeromonas salmonicida was traditionally thought of as a pathogen of salmonids, global reports now confirm that this pathogen has been associated with clinical or covert disease in a variety of salmonid and non-salmonid species in freshwater, brackish water and sea water. Aeromonas salmonicida (strain A449) was isolated from a brown trout in the Eure River, France in 1975 and harbors one chromosome and 5 plasmids. Comparison to the related A.hydrophilia ATCC 7966 (AERHH) show the presence of numerous insertion sequence, some of which are still active and various other mobile elements lreading to substantial genome rearrangements. A.salmonicida is no longer mobile and has also recently lost a type IV and type VI secretion systems, thus probably avoiding the host immune system. It seems to be undergoing genome decay and adaptation to its specific host (adapted from PMID 18801193). (HAMAP: AERS4)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas salmonicida
StrainA449

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Aeromonas salmonicida subsp. salmonicida A449
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Salmo trutta- Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aeromonas salmonicida subsp. salmonicida A449


Gene Summary

Adenine Count

1383 bp

Thymine Count

1171 bp

Guanine Count

1682 bp

Cytosine Count

1380 bp

Genome Length

5616 bp

Protein-coding Genes

9 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinASA_RS18995Not Available+4121087 - 412162319884.7
Hypothetical proteinASA_RS19000Not Available-4121649 - 412326258199.0
Hypothetical proteinASA_RS19005Not Available-4123259 - 412380119544.3
Hypothetical proteinASA_RS19010Not Available-4123798 - 412467931110.3
Putative tail fiber assembly proteinASA_RS19015Not Available-4124676 - 412510116072.7
Putative tail fiber proteinASA_RS19020Not Available-4125117 - 412720775614.5
Tail proteinASA_RS19025Not Available-4127204 - 412780622463.9
Baseplate j/gp47 family proteinASA_RS19030Not Available-4127799 - 412898642933.1
Hypothetical proteinASA_RS19035Not Available-4128983 - 412932412806.4
Putative tail tape measure proteinASA_RS19040Not Available-4129321 - 413137272157.2

Displaying genes 61 – 70 of 4824 in total

Metabolites

1869 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da

Displaying 1–10 of 1869 metabolites