Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase | C0Z19_01575 | Not Available | - | 354077 - 356353 | 84502.5 |
| duf3326 domain-containing protein | C0Z19_01580 | Not Available | + | 356611 - 357993 | 48444.5 |
| phosphopantetheine-binding protein | C0Z19_01585 | Not Available | - | 357975 - 358241 | 10130.3 |
| 2-oxo acid dehydrogenase subunit e2 | C0Z19_01590 | Not Available | - | 358238 - 359410 | 41750.4 |
| alpha-ketoacid dehydrogenase subunit beta | C0Z19_01595 | Not Available | - | 359439 - 360416 | 34886.1 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | C0Z19_01600 | Not Available | - | 360413 - 361435 | 37011.5 |
| acetate--coa ligase | C0Z19_01605 | Not Available | - | 361432 - 363198 | 64243.7 |
| acyl-coa dehydrogenase | C0Z19_01610 | Not Available | - | 363402 - 364535 | 40513.7 |
| arac family transcriptional regulator | C0Z19_01615 | Not Available | + | 364840 - 365859 | 37434.9 |
| hypothetical protein | C0Z19_01620 | Not Available | + | 365989 - 368166 | 80728.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.