Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase | C0Z19_03020 | Not Available | + | 672548 - 673645 | 40010.1 |
| atpase | C0Z19_03025 | Not Available | - | 673865 - 674449 | 21951.3 |
| penicillin acylase family protein | C0Z19_03030 | Not Available | - | 674655 - 677084 | 87283.6 |
| polyketide cyclase | C0Z19_03035 | Not Available | + | 677306 - 677740 | 16405.7 |
| fad-dependent oxidoreductase | C0Z19_03040 | Not Available | + | 677737 - 679224 | 52763.1 |
| glutathione s-transferase family protein | C0Z19_03045 | Not Available | + | 679221 - 679922 | 25965.9 |
| transcriptional regulator | C0Z19_03050 | Not Available | - | 679944 - 680681 | 26651.7 |
| mfs transporter | C0Z19_03055 | Not Available | + | 680823 - 682196 | 47032.8 |
| l-lysine 6-monooxygenase | C0Z19_03060 | Not Available | + | 682297 - 683625 | 49395.0 |
| cupin domain-containing protein | C0Z19_03065 | Not Available | + | 683697 - 684047 | 13223.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.