Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | C0Z19_02460 | Not Available | - | 546554 - 547450 | 33208.6 |
| bifunctional udp-4-keto-pentose/udp-xylose synthase | C0Z19_02465 | Not Available | - | 547493 - 548569 | 40392.2 |
| formyltransferase | C0Z19_02470 | Not Available | - | 548566 - 549564 | 35877.7 |
| glycosyltransferase | C0Z19_02475 | Not Available | - | 549561 - 550631 | 39734.2 |
| aminotransferase degt | C0Z19_02480 | Not Available | - | 550638 - 551792 | 41983.4 |
| 4-amino-4-deoxy-l-arabinose transferase | C0Z19_02485 | Not Available | - | 551895 - 552266 | 13007.5 |
| 4-amino-4-deoxy-l-arabinose transferase | C0Z19_02490 | Not Available | - | 552318 - 554057 | 64063.8 |
| hypothetical protein | C0Z19_02495 | Not Available | - | 554154 - 554528 | 13607.5 |
| aminotransferase | C0Z19_02500 | Not Available | + | 554948 - 556195 | 46035.3 |
| homoserine dehydrogenase | C0Z19_02505 | Not Available | + | 556276 - 557601 | 46912.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.