Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C0Z19_26910 | Not Available | - | 5914453 - 5915388 | 35343.7 |
| d-serine ammonia-lyase | C0Z19_26915 | Not Available | + | 5915498 - 5916826 | 46778.1 |
| branched-chain amino acid abc transporter permease | C0Z19_26920 | Not Available | + | 5916993 - 5917188 | 6867.75 |
| rhs family protein | C0Z19_26925 | Not Available | - | 5917189 - 5917420 | 8441.3 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | C0Z19_26930 | Not Available | - | 5917678 - 5920224 | 89868.1 |
| urea transporter | C0Z19_26935 | Not Available | + | 5920504 - 5921490 | 33842.6 |
| hypothetical protein | C0Z19_26940 | Not Available | - | 5921484 - 5921708 | 8213.74 |
| hypothetical protein | C0Z19_26945 | Not Available | + | 5921865 - 5922188 | 12320.0 |
| chromate ion family chromate transporter | C0Z19_26950 | Not Available | + | 5922193 - 5923455 | 43256.6 |
| peroxidase | C0Z19_26955 | Not Available | - | 5923456 - 5924109 | 24151.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.