Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | C0Z19_26280 | Not Available | + | 5774795 - 5777632 | 105052.0 |
| signal peptidase ii | C0Z19_26285 | Not Available | + | 5777632 - 5778135 | 18399.7 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | C0Z19_26290 | Not Available | + | 5778159 - 5779373 | 42890.8 |
| dutp diphosphatase | C0Z19_26295 | Not Available | + | 5779474 - 5779920 | 15768.2 |
| atp-dependent clp protease atp-binding subunit clpa | C0Z19_26300 | Not Available | - | 5780109 - 5782406 | 84099.0 |
| atp-dependent clp protease adapter clps | C0Z19_26305 | Not Available | - | 5782403 - 5782717 | 11850.4 |
| cold shock domain protein cspd | C0Z19_26310 | Not Available | + | 5783331 - 5783537 | 7296.6 |
| gnat family n-acetyltransferase | C0Z19_26315 | Not Available | - | 5783669 - 5784082 | 15488.5 |
| isocitrate dehydrogenase (nadp(+)) | C0Z19_26320 | Not Available | - | 5784212 - 5785468 | 46030.6 |
| pseudouridine synthase | C0Z19_26325 | Not Available | + | 5785788 - 5786357 | 20872.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.