Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eama/rhat family transporter | C0Z19_23700 | Not Available | - | 5213670 - 5214653 | 34608.5 |
| zinc metalloprotease htpx | C0Z19_23705 | Not Available | - | 5214860 - 5215717 | 30868.8 |
| lysine transporter lyse | C0Z19_23710 | Not Available | - | 5215846 - 5216502 | 22879.4 |
| methionyl-trna formyltransferase | C0Z19_23715 | Not Available | - | 5216595 - 5217593 | 34755.0 |
| peptide deformylase | C0Z19_23720 | Not Available | - | 5217637 - 5218140 | 18953.1 |
| dna-protecting protein dpra | C0Z19_23725 | Not Available | + | 5218402 - 5219724 | 45167.1 |
| thioredoxin | C0Z19_23730 | Not Available | + | 5219799 - 5220176 | 13680.2 |
| dna topoisomerase iii | C0Z19_23735 | Not Available | + | 5220415 - 5223087 | 98330.1 |
| lysr family transcriptional regulator | C0Z19_23740 | Not Available | - | 5223288 - 5224394 | 40718.8 |
| hypothetical protein | C0Z19_23745 | Not Available | + | 5224451 - 5224696 | 9381.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.