Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | C0Z19_22925 | Not Available | + | 5042587 - 5043468 | 31029.3 |
| ump kinase | C0Z19_22930 | Not Available | + | 5043664 - 5044377 | 25290.8 |
| ribosome recycling factor | C0Z19_22935 | Not Available | + | 5044472 - 5045032 | 20933.2 |
| di-trans,poly-cis-decaprenylcistransferase | C0Z19_22940 | Not Available | + | 5045091 - 5045888 | 29720.3 |
| phosphatidate cytidylyltransferase | C0Z19_22945 | Not Available | + | 5045882 - 5046703 | 28554.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C0Z19_22950 | Not Available | + | 5046714 - 5047937 | 42990.7 |
| rip metalloprotease rsep | C0Z19_22955 | Not Available | + | 5047945 - 5049318 | 48489.5 |
| outer membrane protein assembly factor bama | C0Z19_22960 | Not Available | + | 5049388 - 5051703 | 84722.0 |
| outer membrane protein chaperone | C0Z19_22965 | Not Available | + | 5051742 - 5052275 | 19158.8 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | C0Z19_22970 | Not Available | + | 5052295 - 5053368 | 36881.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.