Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase accessory protein xdhc | C0Z19_05700 | Not Available | - | 1230622 - 1231164 | 19467.7 |
| xanthine dehydrogenase molybdopterin binding subunit | C0Z19_05705 | Not Available | - | 1231161 - 1233593 | 87767.9 |
| xanthine dehydrogenase small subunit | C0Z19_05710 | Not Available | - | 1233684 - 1235267 | 57092.2 |
| mfs transporter | C0Z19_05715 | Not Available | + | 1235536 - 1236774 | 41600.1 |
| selenium-binding protein | C0Z19_05720 | Not Available | + | 1237103 - 1238497 | 52196.3 |
| hypothetical protein | C0Z19_05725 | Not Available | + | 1238586 - 1239230 | 21796.0 |
| alanine--glyoxylate aminotransferase | C0Z19_05730 | Not Available | - | 1239258 - 1240475 | 42975.2 |
| enoyl-coa hydratase | C0Z19_05740 | Not Available | + | 1241365 - 1242192 | 28070.7 |
| fumarylacetoacetase | C0Z19_05745 | Not Available | - | 1242282 - 1243676 | 49882.2 |
| homogentisate 1,2-dioxygenase | C0Z19_05750 | Not Available | - | 1243631 - 1244986 | 49522.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.