Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | C0Z19_05595 | Not Available | - | 1203719 - 1205443 | 63756.1 |
| hypothetical protein | C0Z19_05605 | Not Available | + | 1206303 - 1206812 | 17178.2 |
| colanic acid biosynthesis glycosyltransferase wcai | C0Z19_05610 | Not Available | - | 1206834 - 1208237 | 50302.9 |
| glycosyl transferase | C0Z19_05615 | Not Available | - | 1208234 - 1209421 | 43566.6 |
| gdp-fucose synthetase | C0Z19_05620 | Not Available | - | 1209442 - 1210395 | 34781.5 |
| gdp-mannose 4,6-dehydratase | C0Z19_05625 | Not Available | - | 1210406 - 1211533 | 42564.4 |
| protein tyrosine kinase | C0Z19_05630 | Not Available | - | 1211596 - 1213836 | 80910.4 |
| sugar abc transporter substrate-binding protein | C0Z19_05635 | Not Available | - | 1213894 - 1214943 | 37279.7 |
| undecaprenyl-phosphate glucose phosphotransferase | C0Z19_05640 | Not Available | - | 1215168 - 1216565 | 52026.1 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | C0Z19_05645 | Not Available | - | 1216606 - 1218117 | 54317.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.