Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia soli str. GP25-8
Accession NumberPNYB00000000.1
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein uref | C0Z19_05075 | Not Available | + | 1093428 - 1094108 | 24324.9 |
| urease accessory protein ureg | C0Z19_05080 | Not Available | + | 1094151 - 1094771 | 22221.2 |
| 3-deoxy-d-manno-octulosonic acid transferase | C0Z19_05085 | Not Available | - | 1094932 - 1096248 | 47167.4 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | C0Z19_05090 | Not Available | - | 1096355 - 1097239 | 33279.3 |
| lipopolysaccharide heptosyltransferase i | C0Z19_05095 | Not Available | - | 1097273 - 1098316 | 37963.0 |
| duf2242 domain-containing protein | C0Z19_05100 | Not Available | + | 1098522 - 1099301 | 26591.1 |
| phosphomannomutase/phosphoglucomutase | C0Z19_05105 | Not Available | - | 1099398 - 1100792 | 50562.4 |
| hypothetical protein | C0Z19_05110 | Not Available | + | 1101036 - 1102292 | 45510.5 |
| glycosyl transferase | C0Z19_05115 | Not Available | + | 1102289 - 1103122 | 30673.2 |
| glycosyl transferase | C0Z19_05120 | Not Available | + | 1103155 - 1104378 | 45151.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.