Thermofilum pendens Hrk 5

RodNon-motileAnaerobic

Kingdom

Thermoproteati

Phylum

Thermoproteota

Class

Thermoprotei

Order

Thermofilales

Family

Thermofilaceae

Genus

Thermofilum

Description

Thermofilum pendens (strain Hrk5) is a a sulfur-dependent, anaerobic heterotroph archaea. It forms long thin filaments and may have an unusual mode of reproduction in which spherical bulges form at one end of the cell. It is an extracellular commensal, requiring an extract of another crenarchaeota Thermoproteus tenax for growth, and the genome sequence reveals that biosynthetic pathways for purines, most amino acids, and most cofactors are absent. Besides the lack of biosynthesis, several nutrient transporters that are not found in any other crenarchaeote are present in T. pendens. It appears that T. pendens has adapted to life in an environment rich in nutrients and grows mainly by peptide fermentation. It was known previously to utilize peptides as an energy source, but the genome revealed a substantial ability to grow on carbohydrates. T. pendens may obtain energy from sulfur reduction with hydrogen and formate as electron donors. It may also be capable of sulfur-independent growth on formate with formate hydrogen lyase. (HAMAP: THEPD)

Taxonomy

KingdomThermoproteati
PhylumThermoproteota
ClassThermoprotei
OrderThermofilales
FamilyThermofilaceae
GenusThermofilum
SpeciesThermofilum pendens
StrainHrk 5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature88
Temperature rangeHyperthermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Thermofilum pendens Hrk 5

Accession NumberNC_008696.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinTPEN_RS09375Not Available-47 - 171460193.6
hypothetical proteinTPEN_RS09380Not Available-1778 - 207410318.4
type ii caax prenyl endopeptidase rce1 family proteinTPEN_RS09385Not Available-2071 - 301533426.9
hypothetical proteinTPEN_RS09390Not Available-3012 - 357219659.9
hypothetical proteinTPEN_RS09395Not Available-3585 - 38038000.28
hypothetical proteinTPEN_RS09400Not Available-3846 - 422614382.1
hypothetical proteinTPEN_RS09405Not Available-4306 - 467713843.5
hypothetical proteinTPEN_RS09410Not Available-4677 - 514717749.9
hypothetical proteinTPEN_RS09415Not Available-5211 - 558814617.2
hypothetical proteinTPEN_RS09420Not Available-5762 - 59958688.49

Displaying genes 1 – 10 of 1961 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites