Polaromonas naphthalenivorans CJ2

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Polaromonas

Description

Polaromonas naphthalenivorans (strain CJ2) is a Gram-negative bacterium phylogenetically associated with the beta subdivision of the Proteobacteria. Polaromonas naphthalenivorans was isolated from naphthalene-contaminated, freshwater sediment. This organism is capable of aerobic degradation of naphthalene at temperatures of less than 20 degrees Celsius. Naphthalene is the simplest member of a class of important contaminants, the polycyclic aromatic hydrocarbons (PAHs). PAHs can be toxic and/or carcinogenic, therefore PAH contamination is of considerable concern. The ability of Polaromonas naphthalenivorans to degrade PAHs at low temperatures makes it a potential bioremediation agent. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPolaromonas
SpeciesPolaromonas naphthalenivorans
StrainCJ2

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Polaromonas naphthalenivorans CJ2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Polaromonas naphthalenivorans CJ2

Accession NumberNC_008759.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

165 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
conjugal transfer protein tragPNAP_RS20875Not Available+69719 - 7171073011.1
ribbon-helix-helix protein, copg familyPNAP_RS20880Not Available+71707 - 7215916830.0
p-type conjugative transfer atpase trbbPNAP_RS20885Not Available+72156 - 7318736517.5
trbc/virb2 family proteinPNAP_RS20890Not Available+73184 - 7354312407.4
virb3 family type iv secretion system proteinPNAP_RS20895Not Available+73540 - 7382410111.5
conjugal transfer protein trbePNAP_RS20900Not Available+73846 - 7628790115.9
p-type conjugative transfer protein trbjPNAP_RS20905Not Available+76284 - 7701226820.8
p-type conjugative transfer protein trblPNAP_RS20910Not Available+77023 - 7839645122.8
conjugal transfer protein trbfPNAP_RS20915Not Available+78409 - 7911326100.0
p-type conjugative transfer protein trbgPNAP_RS20920Not Available+79110 - 8012336650.1

Displaying genes 4711 – 4720 of 5165 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites