Polaromonas naphthalenivorans CJ2

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Polaromonas

Description

Polaromonas naphthalenivorans (strain CJ2) is a Gram-negative bacterium phylogenetically associated with the beta subdivision of the Proteobacteria. Polaromonas naphthalenivorans was isolated from naphthalene-contaminated, freshwater sediment. This organism is capable of aerobic degradation of naphthalene at temperatures of less than 20 degrees Celsius. Naphthalene is the simplest member of a class of important contaminants, the polycyclic aromatic hydrocarbons (PAHs). PAHs can be toxic and/or carcinogenic, therefore PAH contamination is of considerable concern. The ability of Polaromonas naphthalenivorans to degrade PAHs at low temperatures makes it a potential bioremediation agent. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPolaromonas
SpeciesPolaromonas naphthalenivorans
StrainCJ2

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Polaromonas naphthalenivorans CJ2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Polaromonas naphthalenivorans CJ2

Accession NumberNC_008759.1

Gene Summary

Adenine Count

36753 bp

Thymine Count

37333 bp

Guanine Count

48862 bp

Cytosine Count

48918 bp

Genome Length

171866 bp

Protein-coding Genes

165 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type ii toxin-antitoxin system vapb family antitoxinPNAP_RS24565Not Available-51731 - 519377474.03
hypothetical proteinPNAP_RS25375Not Available-52074 - 5306037346.9
uma2 family endonucleasePNAP_RS24585Not Available-53528 - 5408820538.7
giy-yig nuclease family proteinPNAP_RS24590Not Available-54174 - 5515437121.4
helix-turn-helix domain-containing proteinPNAP_RS24595Not Available+55422 - 556347885.69
duf4926 domain-containing proteinPNAP_RS26595Not Available+56019 - 562287088.55
transcriptional regulatorPNAP_RS28205Not Available+56219 - 564859698.58
transcriptional regulatorPNAP_RS28210Not Available+56635 - 5708116021.1
hypothetical proteinPNAP_RS24610Not Available+57078 - 573419460.44
transcriptional regulatorPNAP_RS24615Not Available-57414 - 575966565.84

Displaying genes 4631 – 4640 of 5165 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites