Polaromonas naphthalenivorans CJ2

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Polaromonas

Description

Polaromonas naphthalenivorans (strain CJ2) is a Gram-negative bacterium phylogenetically associated with the beta subdivision of the Proteobacteria. Polaromonas naphthalenivorans was isolated from naphthalene-contaminated, freshwater sediment. This organism is capable of aerobic degradation of naphthalene at temperatures of less than 20 degrees Celsius. Naphthalene is the simplest member of a class of important contaminants, the polycyclic aromatic hydrocarbons (PAHs). PAHs can be toxic and/or carcinogenic, therefore PAH contamination is of considerable concern. The ability of Polaromonas naphthalenivorans to degrade PAHs at low temperatures makes it a potential bioremediation agent. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPolaromonas
SpeciesPolaromonas naphthalenivorans
StrainCJ2

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Polaromonas naphthalenivorans CJ2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Polaromonas naphthalenivorans CJ2

Accession NumberNC_008759.1

Gene Summary

Adenine Count

36753 bp

Thymine Count

37333 bp

Guanine Count

48862 bp

Cytosine Count

48918 bp

Genome Length

171866 bp

Protein-coding Genes

165 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinPNAP_RS24515Not Available-30822 - 3146323807.5
recombinase family proteinPNAP_RS24520Not Available-31549 - 3213020691.8
nacht domain-containing proteinPNAP_RS24525Not Available-32650 - 38079200810.0
duf4160 domain-containing proteinPNAP_RS24530Not Available+38503 - 3890114980.0
duf2442 domain-containing proteinPNAP_RS24535Not Available+38898 - 3935015670.8
tyrosine-type recombinase/integrasePNAP_RS24540Not Available+39355 - 4035036022.2
dna/rna non-specific endonucleasePNAP_RS24545Not Available+40498 - 4144233513.5
chc2 zinc finger domain-containing proteinPNAP_RS24550Not Available+41897 - 49429277162.0
is1182 family transposasePNAP_RS24555Not Available+49675 - 5116856852.9
type ii toxin-antitoxin system vapc family toxinPNAP_RS24560Not Available-51354 - 5173413845.8

Displaying genes 4621 – 4630 of 5165 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites