Polaromonas naphthalenivorans CJ2

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Polaromonas

Description

Polaromonas naphthalenivorans (strain CJ2) is a Gram-negative bacterium phylogenetically associated with the beta subdivision of the Proteobacteria. Polaromonas naphthalenivorans was isolated from naphthalene-contaminated, freshwater sediment. This organism is capable of aerobic degradation of naphthalene at temperatures of less than 20 degrees Celsius. Naphthalene is the simplest member of a class of important contaminants, the polycyclic aromatic hydrocarbons (PAHs). PAHs can be toxic and/or carcinogenic, therefore PAH contamination is of considerable concern. The ability of Polaromonas naphthalenivorans to degrade PAHs at low temperatures makes it a potential bioremediation agent. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPolaromonas
SpeciesPolaromonas naphthalenivorans
StrainCJ2

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Polaromonas naphthalenivorans CJ2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Polaromonas naphthalenivorans CJ2

Accession NumberNC_008759.1

Gene Summary

Adenine Count

36753 bp

Thymine Count

37333 bp

Guanine Count

48862 bp

Cytosine Count

48918 bp

Genome Length

171866 bp

Protein-coding Genes

165 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
succinate dehydrogenase flavoprotein subunitPNAP_RS15175Not Available+3204466 - 320625964949.3
succinate dehydrogenase iron-sulfur subunitPNAP_RS15180Not Available+3206303 - 320700726631.3
succinate dehydrogenase assembly factor 2PNAP_RS15185Not Available+3207030 - 320733811632.0
citrate synthasePNAP_RS15190Not Available+3207373 - 320868348545.6
lysr family transcriptional regulatorPNAP_RS15195Not Available+3208955 - 320987833867.9
3-isopropylmalate dehydratase large subunitPNAP_RS15200Not Available+3209909 - 321136051780.1
3-isopropylmalate dehydratase small subunitPNAP_RS15205Not Available+3211375 - 321202524167.9
3-isopropylmalate dehydrogenasePNAP_RS15210Not Available+3212099 - 321316938421.4
aspartate-semialdehyde dehydrogenasePNAP_RS15215Not Available+3213429 - 321456840698.4
fimv/hubp family polar landmark proteinPNAP_RS15220Not Available+3214820 - 321743289758.9

Displaying genes 3521 – 3530 of 5165 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites