Polaromonas naphthalenivorans CJ2

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Polaromonas

Description

Polaromonas naphthalenivorans (strain CJ2) is a Gram-negative bacterium phylogenetically associated with the beta subdivision of the Proteobacteria. Polaromonas naphthalenivorans was isolated from naphthalene-contaminated, freshwater sediment. This organism is capable of aerobic degradation of naphthalene at temperatures of less than 20 degrees Celsius. Naphthalene is the simplest member of a class of important contaminants, the polycyclic aromatic hydrocarbons (PAHs). PAHs can be toxic and/or carcinogenic, therefore PAH contamination is of considerable concern. The ability of Polaromonas naphthalenivorans to degrade PAHs at low temperatures makes it a potential bioremediation agent. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPolaromonas
SpeciesPolaromonas naphthalenivorans
StrainCJ2

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Polaromonas naphthalenivorans CJ2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Polaromonas naphthalenivorans CJ2

Accession NumberNC_008759.1

Gene Summary

Adenine Count

36753 bp

Thymine Count

37333 bp

Guanine Count

48862 bp

Cytosine Count

48918 bp

Genome Length

171866 bp

Protein-coding Genes

165 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sigma-54-dependent fis family transcriptional regulatorPNAP_RS03640Not Available-775135 - 77718675410.8
cytochrome c-550 pedfPNAP_RS03645Not Available+777651 - 77808815824.0
transporter substrate-binding domain-containing proteinPNAP_RS03650Not Available+778165 - 77907032640.8
preprotein translocase subunit secaPNAP_RS03655Not Available+779448 - 782213103899.0
bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argjPNAP_RS03660Not Available+782283 - 78352443627.3
atp-binding proteinPNAP_RS03665Not Available+783543 - 78442432618.7
nudix domain-containing proteinPNAP_RS03670Not Available+784421 - 78488817310.9
patatin-like proteinPNAP_RS03675Not Available-784911 - 78736191884.4
hemolysin family proteinPNAP_RS03680Not Available+787586 - 78890548721.1
lytic transglycosylase domain-containing proteinPNAP_RS03685Not Available-788918 - 78958324791.1

Displaying genes 1201 – 1210 of 5165 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites