Haloquadratum walsbyi DSM 16790

SquareShapedNon-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Haloquadratum

Description

A square, non-motile, pigmented halophilic archaea that dominates in most thalassic NaCl-saturated environments, reaching population densities of over 107 cells per ml, this strain was isolated from a Spanish solar saltern. The two unique features of these cells are the wafer like rectangular shape,usually between 2 and 5 micro m and a cell thickness of not more than 0.1 micro m. In their specific habitat these squares are challenged by the sub-lethal conditions of an extremely high MgCl2 concentration and high solar irradiance. This means that although the organism thrives in an aqueous environment it suffers severe desiccation stress. Special mechanisms are therefore required to maintain optimal water activity within the cell and at the cell surface. Concomitant with the extremely high salinity, the amount of dissolved oxygen decreases to near anoxia and some essential nutrients (e.g. phosphates) become unavailable due to complexation with Mg2+. It encodes the largest archaeal protein known to date, halomucin (9159 residues), which is similar to animal mucins. Animal mucins play an important role in protecting various tissues against desiccation or harsh chemical conditions. Halomucin is thought to be exported outside the cell, where it is may be glycosylated, sulfated and sialated; H.walsbyi is the first archaea identified that is probably able to synthesize sialic acid. These modifications, along with the potential capacity to synthesize and poly-gamma-glutamate capsule, probably create an aqueous shield and in the case of the capsule may also help maintain the unique shape of the cell. (HAMAP: HALWD)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHaloquadratum
SpeciesHaloquadratum walsbyi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeSquareShaped
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourcePhototroph
PathogenicityNo

Genome Summary

Haloquadratum walsbyi DSM 16790

Accession NumberNC_008213.1

Gene Summary

Adenine Count

12172 bp

Thymine Count

12352 bp

Guanine Count

11340 bp

Cytosine Count

11003 bp

Genome Length

46867 bp

Protein-coding Genes

41 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
impact family proteinHQ_RS00155Not Available+34897 - 3557724564.4
uracil phosphoribosyltransferaseHQ_RS00160Not Available-36040 - 3672024225.9
hypothetical proteinHQ_RS16395Not Available-36710 - 368324449.94
hypothetical proteinHQ_RS00165Not Available-36859 - 370416475.12
hypothetical proteinHQ_RS00170Not Available+37194 - 3754112766.9
hypothetical proteinHQ_RS00175Not Available+37712 - 379307849.92
cobw family gtp-binding proteinHQ_RS00180Not Available-37976 - 3929548367.8
hypothetical proteinHQ_RS00185Not Available+39445 - 3974111736.8
arsa family atpaseHQ_RS00190Not Available+39750 - 4073336701.0
carbon starvation protein aHQ_RS00195Not Available+40822 - 4262763403.6

Displaying genes 31 – 40 of 2934 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites