Acidovorax sp. KKS102

Gram-negativeNon-motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax sp. KKS102 is a Gram-negative bacterium known for its remarkable capacity to degrade hydrocarbons, making it a notable member of the microbial community in soil environments. As a chemoheterotroph, Acidovorax sp. KKS102 utilizes organic compounds as both carbon and energy sources, allowing it to thrive in nutrient-rich soil conditions, particularly in areas contaminated with organic pollutants.This microbe is nonsporulating, which indicates that it does not form spores to withstand harsh conditions, but instead relies on its metabolic versatility to navigate environmental changes. Although specific details regarding its optimal temperature and oxygen requirements remain unspecified, its ecological niche suggests it is well adapted to the fluctuating conditions often found in soil habitats. The ability of Acidovorax sp. KKS102 to break down hydrocarbons positions it as a potential agent for bioremediation, a process that harnesses microbial metabolism to clean up contaminated environments. Its presence in soils tainted with petroleum and other hydrocarbons may facilitate the restoration of these ecosystems, promoting a healthier balance of soil microbiota and enhancing soil quality. By participating in the degradation of environmental pollutants, Acidovorax sp. KKS102 not only contributes to soil health but also underscores the indispensable role of soil microbiomes in ecological resilience and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax sp. KKS102
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Acidovorax sp. KKS102

Accession NumberNC_018708.1

Gene Summary

Adenine Count

913248 bp

Thymine Count

909914 bp

Guanine Count

1688808 bp

Cytosine Count

1684965 bp

Genome Length

5196935 bp

Protein-coding Genes

4747 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pilt/pilu family type 4a pilus atpaseC380_RS02205Not Available-472047 - 47318341890.8
crp/fnr family transcriptional regulatorC380_RS02210Not Available-473242 - 47387723276.2
type iv pilus twitching motility protein piltC380_RS02215P24559-473945 - 47498838137.2
yggs family pyridoxal phosphate-dependent enzymeC380_RS02220Q9KUQ4+475026 - 47574525317.6
low-specificity l-threonine aldolaseC380_RS02225O07051-475752 - 47682238200.4
branched-chain amino acid abc transporter substrate-binding proteinC380_RS02230Q2YL86-476932 - 47817644638.4
tetr/acrr family transcriptional regulatorC380_RS02235Not Available-478244 - 47899328048.7
amp-binding proteinC380_RS02240P94547+479128 - 48073857992.1
carboxyl transferase domain-containing proteinC380_RS02245P96890+480826 - 484098113895.0
lyse family translocatorC380_RS02250Q8Z3B4-484105 - 48471621407.8

Displaying genes 601 – 610 of 4887 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

314 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da

Displaying 1–10 of 314 metabolites