Burkholderia pseudomallei 1106a

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia pseudomallei is an opportunistic pathogen and a common cause of human pneumonia and fatal bacteremias in endemic areas. Clinical manifestations of B. pseudomallei infection, a disease known as melioidosis, vary greatly from an asymptomatic state, to benign pneumonitis, to acute or chronic pneumonia, or to overwhelming septicemia. Treatment of melioidosis can involve up to nine months of antibiotic therapy, and relapse of the disease is common. The latency period of the organism may vary from two days to 26 years. It is endemic in Southeast Asia and northern Australia, but has also been found in Africa, the Middle East, Europe, Central and South America. Besides humans, melioidosis can affect animals such as sheep, goats, horses, swine, dogs and cats. Transmission occurs by contact with contaminated soil and water, through skin abrasions or inhalation of dust. In northeastern Thailand, B.pseudomallei accounts for 20% of bacterial septicaemias (adapted from http://www.cdc.gov/ncidod/dbmd/diseaseinfo/melioidosis_g.htm). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia pseudomallei
Strain1106a

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Burkholderia pseudomallei 1106a
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityYes

Genome Summary

Burkholderia pseudomallei 1106a

Accession NumberNC_009078.1

Gene Summary

Adenine Count

486952 bp

Thymine Count

485397 bp

Guanine Count

1059270 bp

Cytosine Count

1069175 bp

Genome Length

3100794 bp

Protein-coding Genes

2728699 genes

Non-Coding Genes

372095 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf3005 domain-containing proteinBURPS1106A_RS17875Not Available-36390 - 3680614706.2
hypothetical proteinBURPS1106A_RS17880Not Available+37073 - 373098671.96
serine o-acetyltransferase epscBURPS1106A_RS17885Q59967+37433 - 3835633550.4
sdr family oxidoreductaseBURPS1106A_RS17895P73574-38588 - 3939128805.1
gtp cyclohydrolase i foleBURPS1106A_RS17900Q3BM80-39392 - 4010225862.0
lysr family transcriptional regulatorBURPS1106A_RS17905P10183-40258 - 4118134217.3
4-hydroxybenzoate 3-monooxygenaseBURPS1106A_RS17910C4TP09+41298 - 4252145244.7
3-oxoacid coa-transferase subunit aBURPS1106A_RS17915Q01103+42729 - 4344225124.3
coa transferase subunit bBURPS1106A_RS17920P0A101+43461 - 4411723099.8
3-carboxy-cis,cis-muconate cycloisomeraseBURPS1106A_RS17925O31385+44253 - 4561147955.1

Displaying genes 41 – 50 of 6270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

180 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000243heteropyrithiamineC11H13N4Chemical structure of heteropyrithiamineNot available
Average201.252Da
Monoisotopic201.113472855Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da

Displaying 1–10 of 180 metabolites