Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DWW04_04245 | Not Available | - | 991239 - 992594 | 49626.2 |
| pyridine nucleotide-disulfide oxidoreductase | DWW04_04250 | Not Available | + | 992831 - 995332 | 90618.5 |
| marr family transcriptional regulator | DWW04_04255 | Not Available | + | 995366 - 995695 | 12279.9 |
| clc family h(+)/cl(-) exchange transporter | DWW04_04260 | Not Available | + | 995728 - 997326 | 59634.0 |
| type ii crispr rna-guided endonuclease cas9 | DWW04_04265 | Not Available | + | 997511 - 1002025 | 175906.0 |
| cell filamentation protein fic | DWW04_04270 | Not Available | + | 1002040 - 1003038 | 38475.0 |
| type ii crispr-associated endonuclease cas1 | DWW04_04275 | Not Available | + | 1003065 - 1003997 | 35024.7 |
| crispr-associated endonuclease cas2 | DWW04_04280 | Not Available | + | 1003997 - 1004329 | 12889.6 |
| hypothetical protein | DWW04_04285 | Not Available | - | 1005421 - 1006002 | 22794.8 |
| ktsc domain-containing protein | DWW04_04290 | Not Available | - | 1006067 - 1006252 | 7242.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
