Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4250 domain-containing protein | DWW04_04195 | Not Available | + | 981256 - 981432 | 6921.42 |
| arac family transcriptional regulator | DWW04_04200 | Not Available | - | 981495 - 982382 | 34472.4 |
| o-succinylbenzoic acid--coa ligase | DWW04_04205 | Not Available | - | 982638 - 983723 | 40574.4 |
| o-succinylbenzoate synthase | DWW04_04210 | Not Available | - | 983720 - 984775 | 39823.9 |
| mmcq/yjbr family dna-binding protein | DWW04_04215 | Not Available | - | 984754 - 985137 | 14976.9 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DWW04_04220 | Not Available | - | 985158 - 985979 | 30338.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DWW04_04225 | Not Available | - | 985979 - 987652 | 62947.0 |
| isochorismate synthase | DWW04_04230 | Not Available | - | 987652 - 988821 | 44347.8 |
| hotdog fold thioesterase | DWW04_04235 | Not Available | - | 988818 - 989225 | 14540.6 |
| slc13 family permease | DWW04_04240 | Not Available | + | 989414 - 991276 | 67150.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
