Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | DWW04_03925 | Not Available | + | 913977 - 915152 | 44572.7 |
| tonb-dependent receptor | DWW04_03930 | Not Available | + | 915368 - 918589 | 118922.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_03935 | Not Available | + | 918603 - 920456 | 69762.4 |
| duf4976 domain-containing protein | DWW04_03940 | Not Available | + | 920480 - 922054 | 61151.8 |
| hybrid sensor histidine kinase/response regulator | DWW04_03945 | Not Available | - | 922105 - 925998 | 148759.0 |
| glycoside hydrolase family 95 protein | DWW04_03950 | Not Available | - | 926206 - 928662 | 92233.4 |
| insulinase family protein | DWW04_03955 | Not Available | - | 928761 - 929981 | 46472.2 |
| tigr00730 family rossman fold protein | DWW04_03960 | Not Available | + | 930083 - 930619 | 19870.1 |
| sis domain-containing protein | DWW04_03965 | Not Available | + | 930637 - 931239 | 21811.6 |
| carbohydrate kinase | DWW04_03970 | Not Available | + | 931354 - 932274 | 34538.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
