Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyprenyl synthetase family protein | DWW04_03620 | Not Available | + | 844013 - 844987 | 36218.4 |
| deoxyribose-phosphate aldolase | DWW04_03625 | Not Available | - | 845168 - 846115 | 34817.3 |
| pyrophosphatase | DWW04_03630 | Not Available | - | 846122 - 846442 | 12299.6 |
| d-tyrosyl-trna(tyr) deacylase | DWW04_03635 | Not Available | - | 846442 - 846894 | 16634.2 |
| excinuclease abc subunit uvrc | DWW04_03640 | Not Available | - | 847051 - 848871 | 69899.8 |
| adenine phosphoribosyltransferase | DWW04_03645 | Not Available | - | 849225 - 849749 | 19108.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DWW04_03650 | Not Available | - | 849809 - 851680 | 69629.1 |
| flotillin family protein | DWW04_03655 | Not Available | - | 851827 - 853527 | 62531.3 |
| hypothetical protein | DWW04_03660 | Not Available | - | 853553 - 854086 | 20202.4 |
| rrna maturation rnase ybey | DWW04_03665 | Not Available | - | 854321 - 854737 | 15867.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
