Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | DWW04_03315 | Not Available | - | 764300 - 767134 | 108279.0 |
| hybrid sensor histidine kinase/response regulator | DWW04_03320 | Not Available | + | 767502 - 771485 | 152753.0 |
| duf4982 domain-containing protein | DWW04_03325 | Not Available | + | 771625 - 774063 | 92971.0 |
| tonb-dependent receptor | DWW04_03330 | Not Available | + | 774097 - 777150 | 113928.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_03335 | Not Available | + | 777165 - 778946 | 68797.7 |
| protease | DWW04_03340 | Not Available | - | 779013 - 782237 | 120796.0 |
| rna polymerase sigma-70 factor | DWW04_03345 | Not Available | + | 782416 - 783003 | 22777.2 |
| fecr family protein | DWW04_03350 | Not Available | + | 783092 - 784102 | 38718.6 |
| susc/raga family tonb-linked outer membrane protein | DWW04_03355 | Not Available | + | 784167 - 787694 | 131521.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_03360 | Not Available | + | 787716 - 789638 | 73085.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
