Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW04_03265 | Not Available | - | 752715 - 752903 | 6688.22 |
| radical sam protein | DWW04_03270 | Not Available | - | 753436 - 754212 | 29335.2 |
| helix-hairpin-helix domain-containing protein | DWW04_03275 | Not Available | - | 754258 - 756330 | 81258.1 |
| duf4294 domain-containing protein | DWW04_03280 | Not Available | + | 756427 - 756999 | 22062.0 |
| trmh family rna methyltransferase | DWW04_03285 | Not Available | - | 757030 - 757566 | 20012.2 |
| tonb-dependent receptor | DWW04_03290 | Not Available | + | 758288 - 760606 | 88745.1 |
| quinolinate synthase nada | DWW04_03295 | Not Available | + | 760708 - 761700 | 36608.0 |
| non-canonical purine ntp diphosphatase | DWW04_03300 | Not Available | - | 761955 - 762536 | 21352.7 |
| n-acetyltransferase | DWW04_03305 | Not Available | + | 762696 - 763223 | 20715.6 |
| yitt family protein | DWW04_03310 | Not Available | - | 763322 - 764218 | 33215.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
