Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW04_03165 | Not Available | - | 709713 - 713048 | 122693.0 |
| s9 family peptidase | DWW04_03170 | Not Available | - | 713578 - 715821 | 85692.8 |
| glycoside hydrolase family 127 protein | DWW04_03175 | Not Available | - | 715833 - 718238 | 89713.0 |
| glycoside hydrolase | DWW04_03180 | Not Available | - | 718309 - 720711 | 89865.8 |
| glycoside hydrolase family 97 protein | DWW04_03185 | Not Available | - | 720748 - 723471 | 103267.0 |
| duf4859 domain-containing protein | DWW04_03190 | Not Available | - | 723670 - 725934 | 84424.6 |
| duf4859 domain-containing protein | DWW04_03195 | Not Available | - | 726190 - 727200 | 36202.2 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_03200 | Not Available | - | 727232 - 728911 | 63688.1 |
| tonb-dependent receptor | DWW04_03205 | Not Available | - | 728932 - 731961 | 112994.0 |
| glycoside hydrolase family 127 protein | DWW04_03210 | Not Available | - | 731996 - 734431 | 91067.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
