Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei
Accession NumberQRZL00000000.1
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWW04_03065 | Not Available | - | 682985 - 683482 | 19135.2 |
| zinc abc transporter substrate-binding protein | DWW04_03070 | Not Available | + | 684157 - 685062 | 33993.4 |
| metal abc transporter atp-binding protein | DWW04_03075 | Not Available | + | 685072 - 685839 | 28695.6 |
| duf2723 domain-containing protein | DWW04_03080 | Not Available | + | 686300 - 689704 | 129139.0 |
| polysaccharide deacetylase family protein | DWW04_03085 | Not Available | + | 689775 - 690386 | 24627.9 |
| duf4861 domain-containing protein | DWW04_03090 | Not Available | - | 690444 - 691616 | 42916.6 |
| gluconate 5-dehydrogenase | DWW04_03095 | Not Available | - | 691713 - 692516 | 28589.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DWW04_03100 | Not Available | - | 692553 - 693395 | 31850.9 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DWW04_03105 | Not Available | - | 693566 - 694966 | 52348.7 |
| dihydrolipoyl dehydrogenase | DWW04_03110 | Not Available | - | 694966 - 696306 | 47674.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
